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1

Dating Phylogenies with Hybrid Local Molecular Clocks

Aris-Brosou, Stéphane, Pybus, Oliver

Journal:

Year:

2007

Language:

english

File:

PDF, 174 KB

english, 2007

2

Flight costs in volant vertebrates: A phylogenetically-controlled meta-analysis of birds and bats

Guigueno, Mélanie F., Shoji, Akiko, Elliott, Kyle H., Aris-Brosou, Stéphane

Journal:

Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology

Year:

2019

Language:

english

File:

PDF, 3.32 MB

english, 2019

3

Spatial and temporal dynamics of rabies virus variants in big brown bat populations across Canada: footprints of an emerging zoonosis

SUSAN A. NADIN-DAVIS, YUQIN FENG, DELPHINE MOUSSE, ALEXANDER I. WANDELER, STÉPHANE ARIS-BROSOU

Journal:

Molecular Ecology

Year:

2010

Language:

english

File:

PDF, 1.50 MB

english, 2010

4

The nonadaptive nature of the H1N1 2009 Swine Flu pandemic contrasts with the adaptive facilitation of transmission to a new host

Juwaeriah Abdussamad, Stéphane Aris-Brosou

Journal:

BMC Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 701 KB

english, 2011

5

Predicting the Emergence of H3N2 Influenza Viruses Reveals Contrasted Modes of Evolution of HA and NA Antigens

Sandie, Reatha, Aris-Brosou, Stéphane

Journal:

Journal of Molecular Evolution

Year:

2014

Language:

english

File:

PDF, 662 KB

english, 2014

6

How the Central American Seaway and an Ancient Northern Passage Affected Flatfish Diversification

Byrne, Lisa, Chapleau, François, Aris-Brosou, Stéphane, Gojobori, Jun

Journal:

Molecular Biology and Evolution

Year:

2018

Language:

english

File:

PDF, 2.33 MB

english, 2018

7

Microbial DNA records historical delivery of anthropogenic mercury

Poulain, Alexandre J, Aris-Brosou, Stéphane, Blais, Jules M, Brazeau, Michelle, Keller, Wendel (Bill), Paterson, Andrew M

Journal:

The ISME Journal

Year:

2015

Language:

english

File:

PDF, 904 KB

english, 2015

8

Least and Most Powerful Phylogenetic Tests to Elucidate the Origin of the Seed Plants in the Presence of Conflicting Signals under Misspecified Models

Stéphane Aris-Brosou

Journal:

Systematic Biology

Year:

2003

Language:

english

File:

PDF, 2.01 MB

english, 2003

9

Microbial Community Structure in Lake and Wetland Sediments from a High Arctic Polar Desert Revealed by Targeted Transcriptomics

Stoeva, Magdalena K., Aris-Brosou, Stéphane, Chételat, John, Hintelmann, Holger, Pelletier, Philip, Poulain, Alexandre J., Ibekwe, A. Mark

Journal:

Year:

2014

Language:

english

File:

PDF, 711 KB

english, 2014

10

Phylogenetic Analyses: A Toolbox Expanding towards Bayesian Methods

Aris-Brosou, Stéphane, Xia, Xuhua

Journal:

International Journal of Plant Genomics

Year:

2008

Language:

english

File:

PDF, 1.23 MB

english, 2008

11

Identifying sites under positive selection with uncertain parameter estimates

Aris-Brosou, Stéphane

Journal:

Year:

2006

File:

PDF, 331 KB

2006

12

Both Epistasis and Diversifying Selection Drive the Structural Evolution of the EBOV Glycoprotein Mucin-like Domain

Ibeh, Neke, Nshogozabahizi, Jean Claude, Aris-Brosou, Stéphane

Journal:

Journal of Virology

Year:

2016

Language:

english

File:

PDF, 2.81 MB

english, 2016

13

The Metabolic Consequences of Hepatic AMP-Kinase Phosphorylation in Rainbow Trout

Polakof, Sergio, Panserat, Stéphane, Craig, Paul M., Martyres, David J., Plagnes-Juan, Elisabeth, Savari, Sharareh, Aris-Brosou, Stéphane, Moon, Thomas W., Kretzschmar, Doris

Journal:

Year:

2011

Language:

english

File:

PDF, 1.24 MB

english, 2011

14

Incubation Patterns in a Central-Place Forager Affect Lifetime Reproductive Success: Scaling of Patterns from a Foraging Bout to a Lifetime

Shoji, Akiko, Elliott, Kyle H., Aris-Brosou, Stéphane, Crump, Doug, Gaston, Anthony J., Browman, Howard

Journal:

Year:

2011

Language:

english

File:

PDF, 294 KB

english, 2011

15

Predictors of incubation costs in seabirds: an evolutionary perspective

Shoji, Akiko, Elliott, Kyle H., Aris-Brosou, Stéphane, Wilson, Rory P., Gaston, Anthony J., Pichegru, Lorien

Journal:

Year:

2015

Language:

english

File:

PDF, 562 KB

english, 2015

16

Foraging flexibility and search patterns are unlinked during breeding in a free-ranging seabird

Shoji, Akiko, Aris-Brosou, Stéphane, Owen, Ellie, Bolton, Mark, Boyle, Dave, Fayet, Annette, Dean, Ben, Kirk, Holly, Freeman, Robin, Perrins, Chris, Guilford, Tim

Journal:

Year:

2016

Language:

english

File:

PDF, 1.11 MB

english, 2016

17

Large-scale analyses of synonymous substitution rates can be sensitive to assumptions about the process of mutation

Stéphane Aris-Brosou, Joseph P. Bielawski

Journal:

Year:

2006

Language:

english

File:

PDF, 355 KB

english, 2006

18

Effects of Models of Rate Evolution on Estimation of Divergence Dates with Special Reference to the Metazoan 18S Ribosomal RNA Phylogeny

Stéphane Aris-Brosou and Ziheng Yang

Journal:

Systematic Biology

Year:

2002

Language:

english

File:

PDF, 658 KB

english, 2002

19

Morphospecies versus Phylospecies Concepts for Evaluating Phytoplankton Diversity: The Case of the Coccolithophores

Young, Jeremy R., Liu, Hui, Probert, Ian, Aris-Brosou, Stéphane, Vargas, Colomban de

Journal:

Cryptogamie Algologie

Year:

2014

Language:

english

File:

PDF, 1.46 MB

english, 2014

20

Inferring influenza global transmission networks without complete phylogenetic information

Aris-Brosou, Stéphane

Journal:

Evolutionary Applications

Year:

2014

Language:

english

File:

PDF, 1.04 MB

english, 2014

21

Direct Evidence of an Increasing Mutational Load in Humans

Aris-Brosou, Stéphane, Gojobori, Jun

Journal:

Molecular Biology and Evolution

Year:

2019

File:

PDF, 8.51 MB

2019

22

Genome analyses suggest the presence of polyploidy and recent human-driven expansions in eight global populations of the honeybee pathogen N osema ceranae

Pelin, Adrian, Selman, Mohammed, Aris-Brosou, Stéphane, Farinelli, Laurent, Corradi, Nicolas

Journal:

Environmental Microbiology

Year:

2015

Language:

english

File:

PDF, 710 KB

english, 2015

23

Widespread Historical Contingency in Influenza Viruses

Nshogozabahizi, Jean Claude, Dench, Jonathan, Aris-Brosou, Stéphane

Journal:

Year:

2017

Language:

english

File:

PDF, 24.43 MB

english, 2017

24

Adaptive Evolution of HIV at HLA Epitopes Is Associated with Ethnicity in Canada

Ragonnet-Cronin, Manon, Aris-Brosou, Stéphane, Joanisse, Isabelle, Merks, Harriet, Vallee, Dominic, Caminiti, Kyna, Sandstrom, Paul, Brooks, James, Poon, Art F. Y.

Journal:

Year:

2012

Language:

english

File:

PDF, 213 KB

english, 2012

25

Viral Long-Term Evolutionary Strategies Favor Stability over Proliferation

Aris-Brosou, Stéphane, Parent, Louis, Ibeh, Neke

Journal:

Year:

2019

Language:

english

File:

PDF, 7.69 MB

english, 2019

26

Viral outbreaks involve destabilized evolutionary networks: evidence from Ebola, Influenza and Zika

Aris-Brosou, Stéphane, Ibeh, Neke, Noël, Jessica

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 2.60 MB

english, 2017

27

Physicochemical Drivers of Microbial Community Structure in Sediments of Lake Hazen, Nunavut, Canada

Ruuskanen, Matti O., St. Pierre, Kyra A., St. Louis, Vincent L., Aris-Brosou, Stéphane, Poulain, Alexandre J.

Journal:

Frontiers in Microbiology

Year:

2018

Language:

english

File:

PDF, 2.07 MB

english, 2018

28

Automatic detection of rate change in large data sets with an unsupervised approach: the case of influenza viruses

Labonté, Kasandra, Aris-Brosou, Stéphane, Bell, J.B.

Journal:

Year:

2016

File:

PDF, 3.72 MB

2016

29

Phylodynamics of the Emergence of Influenza Viruses after Cross-Species Transmission

Rahnama, Leila, Aris-Brosou, Stéphane, Schmitz, Jürgen

Journal:

Year:

2013

Language:

english

File:

PDF, 355 KB

english, 2013

30

Fast Bayesian Choice of Phylogenetic Models: Prospecting Data Augmentation-Based Thermodynamic Integration

Nicolas Rodrigue and Stéphane Aris-Brosou

Journal:

Systematic Biology

Year:

2011

Language:

english

File:

PDF, 1.18 MB

english, 2011

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